RNA-seq of ZM4 in NaAc rep1 - SRA

SRX22720571: RNA-seq of ZM4 in NaAc rep1
1 BGISEQ (BGISEQ-500) run: 18.1M spots, 3.6G bases, 2.3Gb downloads

Design: rRNA was removed with kit after total RNA was collected. Fragmentation buffer was added for interrupting mRNA to short fragments. Taking these short fragments as templates, Random hexamer-primer were used to synthesize the first-strand cDNA. The second-strand cDNA was synthesized using buffer, dATPs,dGTPs,dCTPs,dUTPs, RNase H and DNA polymerase I respectively after removing dNTPs. Short fragments were purified with QiaQuick PCR extraction kit and resolved with EB buffer for end reparation and adding poly(A). After that, the short fragments were connected with sequencing adapters. Then, the UNG enzyme was used to degrade the second-strand cDNA, and the product was purified by MiniElute PCR Purification Kit before PCR amplification. At last, the library could be sequencing using filter.

Submitted by: Hubei University

Study: Zymomonas mobilis tetR family protein knock-out strains transcriptome raw sequence reads

PRJNA1047928 • SRP475473 • All experiments • All runs

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Zymomonas mobilis tetR family protein knock-out strains transcriptome Raw sequence reads

Sample:

SAMN38600166 • SRS19711370 • All experiments • All runs

Organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

Library:

Name: AC-ZM4-1-1A

Instrument: BGISEQ-500

Strategy: RNA-Seq